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Join Legend
Serious alignment problem, requires review.
Zero, or more than one, overlaps
Half dove-tail &50 bp
Alignment identity &98%
Alignment length &50 bp
&2 gaps, each gap &25 bp, not marked as an SSR
&0 gaps, each gap &50 bp, not marked as an SSR
&0 gaps, each gap &500 bp, not marked as an SSR
&0 gaps, each gap &500 bp, marked as an SSR
Minor alignment problem.
Exactly one overlap
Half dove-tail &0 bp and <=50bp
Alignment identity &99.1%
Alignment length &2000 bp
&0 gaps, each gap &25 bp, not marked as an SSR
&0 gaps, each gap &50 bp, not marked as an SSR
&0 gaps, each gap &500 bp, not marked as an SSR
&0 gaps, each gap &500 bp, marked as an SSR
Excellent alignment, meets all defined criteria.
Exactly one RuleInfo
Half dove-tail &=0 bp
Alignment identity &=99.1%
Alignment length &=2000 bp
&=0 gaps, each gap &25 bp, not marked as an SSR
&=0 gaps, each gap &50 bp, not marked as an SSR
&=0 gaps, each gap &500 bp, not marked as an SSR
&=0 gaps, each gap &500 bp, marked as an SSR
Certificate submitted, not yet approved.
Certificate submitted and approved.
Valid, contained clone
Join not evaluated due to one accession not being finished.
Curator Links
Alignment for AC and AC
TypePoint1Point2Orient1Orient2CuratorCommentTimeIdAlignmentReleases
Switch Points
A1161024--chenhcTaxid 10090 chrom 3 Primary assembly 16:51:05.4735689916654GRCm38, MGSCv37
Mismatches = 0, Gaps = 0, Length = 13112
Percent identity = 100%
Score = 2.599e+04 bits (13112), Expect = 0
2 BAC and 0 Fosmid bridging clones.
2 BAC and 0 Fosmid concordant clones.
0 BAC and 0 Fosmid discordant clones.
gatcctccggtagtactatgtccaattttctgaggatccgccagactgatttccagagtg 13053
............................................................ 174077
gttgtacaagcttgcaatcccaccaacaatggaggagtgttcctctttctccacatcctc 12993
............................................................ 174017
gccaacatctgctgtcacctgagtttttgatcttagccattctgactggagtgaagtgga 12933
............................................................ 173957
atctcagtgttgttttgatttgtatttccctgatgattaaggatattgaacattttttca 12873
............................................................ 173897
ggtgtttctctgccaatcggtatttctcaggtgagaattctttgttcagctctgagcccc 12813
............................................................ 173837
attttttaatggggttatttgattttctggagtccaccttcttgagttctttatatatat 12753
............................................................ 173777
tggatattagtcccctatccgatttgggataggtaaagatcctttcccaatctgttggtg 12693
............................................................ 173717
gcctttttgtcttattgacggtgtcttttgctttgcagaagctttgcaattttatgaggt 12633
............................................................ 173657
cccatcttacagcacaagccattgctgttctattcaggaaattttcccctgtacccatat 12573
............................................................ 173597
cttccaaggttttccctactttctcctctataagtttcactgtctctgcttttatgtgga 12513
............................................................ 173537
gtttcttgatccacttatatttgaccttagtacaaggagatagaaatggatcaattcaca 12453
............................................................ 173477
ttcttctacatgataactgccagttgtgccagcaccatttgttgaaaatgctgtcttttt 12393
............................................................ 173417
tccactggatggttttagctcccttgtcaaagatcaagtgaccataggtgtgtgggttaa 12333
............................................................ 173357
tctctgggtcttcaattctgttccattggtctacatgtctgtcactataccagtaccatg 12273
............................................................ 173297
cagttctgatcacaattgctctgtagtacagttttaggtccggcatggtgattccaccag 12213
............................................................ 173237
aggttcttttatccttgagaagagtttttgctatcttaggtttttttgttattccagatg 12153
............................................................ 173177
aatctgccgattgccctttctaattcgttgaagaattgagttggaattttgatggggatt 12093
............................................................ 173117
gcattgaatctgtagattgcttttggcaagatagccatttttaccatgttgatcttgcca 12033
............................................................ 173057
atccatgagcatgggagatctttccatcttctgagatctgctttaatttctttcttcaga 11973
............................................................ 172997
gacttgaagttcttatcatacagatctttcacttccttagttagagccacgccaaggtat 11913
............................................................ 172937
tttatattatttgtgactattgagaagggtgttgtttccctaatttctttctcagcctgt 11853
............................................................ 172877
ttatcctttgtatacagaaaggccattgacttgtgtgagttaattttatatccagctact 11793
............................................................ 172817
tcattgaagctgtttatcaggtttaggagttctctggtggaatttttagggtcacttata 11733
............................................................ 172757
tatactatcatatcatctccaaaaagtgatattttgacttcttcctttccaatttgtatc 11673
............................................................ 172697
tccttgatctccttttgttgtctaattgctctgactaggacttcaagtacaatgttgaat 11613
............................................................ 172637
aggtagggcgagagtggacagccttgtctagtccctgattttagtgggattgcttccagc 11553
............................................................ 172577
ttctcaccatttactttgatgttggctattggtttgctgtagattgcttttatcatgttt 11493
............................................................ 172517
aggtatgggctttgaattcctgatctttccaagacttttatcatgaatgggtgttggatt 11433
............................................................ 172457
ttgtcaaatgctttctcagcatctaacgagatgatcatgtggtttttgcctttgagtttg 11373
............................................................ 172397
tttatatactggattacattcatggatttccgtatattaaaccatccctgcatccctggg 11313
............................................................ 172337
atgaaacctacttggtcaggatggatgattgttttgatgtgttcttggatacggttagca 11253
............................................................ 172277
agaactttattgaggatttttgcatcaatattcataagggaaattggtctgaagttctct 11193
............................................................ 172217
atctttgttgggtctttttgtggtttaggtatcagagtaattgtggcttcatagaatgag 11133
............................................................ 172157
ttgggtagagtaccttccatttctattttgtggactagtttgtgaagaactggaattagg 11073
............................................................ 172097
tcttctttgaaggtctgatagaactctgaattaaacccatctggtcctgggatttttttg 11013
............................................................ 172037
gctgggagactattaataactgcttgtatttctttaggggatatgggactgtttagatgg 10953
............................................................ 171977
tcaacttgatcctaattcaactttgttacctggtatctgtccagaaatttgtccatttcg 10893
............................................................ 171917
tccaggatttccagttttgttgagtatagccttttgtagaaggatctgatggtgttttgg 10833
............................................................ 171857
atttcttcaggatctgttgttatgtctcccttttcatttctgattttgttaattaggatt 10773
............................................................ 171797
ttgtccctgtgccctctagtgagtctagctaagggtttatctatcttgttgattttctca 10713
............................................................ 171737
aagaaccaactcctcctttggttaattctttgaatagttcttcttgtttccacttggttg 10653
............................................................ 171677
atttcacccctgagtttgattatttcctgccttctactcctcttcggtgaatttgcttcc 10593
............................................................ 171617
ttttcttctagaccttttaggtgtgttgtcaagctgctaatgtgtgctctctctagtatc 10533
............................................................ 171557
tttttggaggcactcagagctatgagttttcctcttaggaatgctttcattgtgtcccat 10473
............................................................ 171497
aagtttgggtatgttgtggcttcattttcattaaactccaaaaagtccttaatttctttc 10413
............................................................ 171437
tttattccttccttgaccaaggtatcattgagaagagtgttgttcagtttccacgtgaat 10353
............................................................ 171377
gttggctttctattatttattctgttattgaagatcagccttagtccatggtgatctgat 10293
............................................................ 171317
aggatgcatgggacaatttcaatatttttgtatatgttgaggcttgttttgtgaccaatt 10233
............................................................ 171257
atgtggtcagttttagagaaggtaccatgaggtgctgagaagaaggtatatccttttgtt 10173
............................................................ 171197
ttaggataaaactttctatagatatctgttaagtccatttgtttaatcacttctgttagt 10113
............................................................ 171137
ttcactgtgtccctgtttagtttctgtttccatgatctgtccattggtgaaagtggtctg 10053
............................................................ 171077
ttgaagtctcccactattattgtgtgagttgcaatgtgtgctttgagctttactaaagtt 9993
............................................................ 171017
tctttaatgaatgtggctgcccttgtatttggagcatagatattcagaattgagagttcc 9933
............................................................ 170957
tcttggaggattttacctttgatgagtatgaagtgcccctccttgtcttttttgatgact 9873
............................................................ 170897
ttgggttggaagtcaatcttatcagatattaggatgactactccagcttgtttcttcata 9813
............................................................ 170837
ccatttgcttggaaaattgttttccagcctttcattctgaggtagtgtctattttttttt 9753
............................................................ 170777
tctgagatgagtttcctgtaagcagcaaaatgttgggtcttgtttgtgtagccagtttgt 9693
............................................................ 170717
tagtctgtgtctatttattggggagttgagaccattgatattaagagatattaaggaaaa 9633
............................................................ 170657
gtaattgttgcttctttttttgttgttgttaaagttggcattctgttcttgtggctgtct 9573
............................................................ 170597
tcctttagttttgttgagggattatcttcttgttttttctagggcgtggttctcgtcctt 9513
............................................................ 170537
gtattggtttttttctgttattatcctttgaagggctggattcgtggagagataatgggt 9453
............................................................ 170477
gaatttagttttgtcgtggaatactttggtttctccatctatggtaattgagagtttggc 9393
............................................................ 170417
tgggtatagtagcctgggctgaaatttgtgttctcttagtgtctgtataacatctgtcca 9333
............................................................ 170357
ggctcttctggctttcatagtctctggtgaaaaatctggtgtaattctgataggcttgcc 9273
............................................................ 170297
tttatatgttacttgacctttttcccttactgcttttagtattctatctttatttagtgc 9213
............................................................ 170237
atttgatgttctgattattatgtgtcgggagaaatttcttttctggtccagtctatttgg 9153
............................................................ 170177
agttctgtaggcttcttgtatgttcatgggcatctctttctttagatttgggaagttttc 9093
............................................................ 170117
ttcaatgattttgttgaagatgtttgctggtcctttgagttgaaaatcttcattctcatc 9033
............................................................ 170057
cactcctattatctgtaggtttggtcttctcattgtgtcctggatttcctggatattttg 8973
............................................................ 169997
agttagcatctttttgcattttccattttctttgattgttgtgccaatgttctctatgga 8913
............................................................ 169937
atcttctgcacccgagattctctcttccatctcttgtattctgttgctgatgctggcatc 8853
............................................................ 169877
tatggttccagatttctttcctagggtttctttctccagcattgcctcactttgggtttt 8793
............................................................ 169817
ctttattgtgtctacttccctttttaggtctagtatggttttgttcatttccatcacctg 8733
............................................................ 169757
tttggatgtgttttcctgtttttctataaggacttctacctgtttggttgtgttttcctg 8673
............................................................ 169697
tttttctttaaggacttgtaactctttagcagtgttctcctgtatttctttaagtgagtt 8613
............................................................ 169637
attaaattccttctttatgtcctctgccatcatcatgagatatgcttttaaatccaggtc 8553
............................................................ 169577
tatctttttaggtgtgttagggtgccctggactgggcgaagtgggcattctgggttctga 8493
............................................................ 169517
tgatggtgagtggtcctggtttctgttagtaggattcttacgtttacctttcgccatttg 8433
............................................................ 169457
gcaatctctggagttagttgttatagttttctttgtttagagattgttcctctgttgatt 8373
............................................................ 169397
ttgttaccctctatcagcagatgtgggagattagctctctcctctgagtttcagtggtca 8313
............................................................ 169337
gagcagtctctgcaggcaagctctcctctttcagggaaggtgcacagttatctggtgttt 8253
............................................................ 169277
agaacttctcctggctgaagatgaaggcccaaaacaggatctttcccagaagctgtgttg 8193
............................................................ 169217
ctttggccaggaaggtgatcggttgtctggagccgaagatggcgccacctcagaagctct 8133
............................................................ 169157
gtggctctcgcctgtcccagaaacggctggcctctgtattccacaccgtcacccgtgcag 8073
............................................................ 169097
cctgccctccgtggagtcctggagccaaggaggctcccaccggggcctgaggcacaaacc 8013
............................................................ 169037
tctcgggccgggtggacccctgtgctctcaccaggaaggtggctggttgtctctagttca 7953
............................................................ 168977
tctatcttgttgctatggaattccttcactggtcacaacttgtaggaagaacagaaaggc 7893
............................................................ 168917
cctgacaccagggcagtggctgtttcagcataaaagtctgtaaatagccagtggggccac 7833
............................................................ 168857
atagccaggaggcaacttccacatgagggccaaactgaaacttgactgggagcccagaaa 7773
............................................................ 168797
cgacggtgacacagacaatgacagccactggggaactgcacttggaggccacactagctt 7713
............................................................ 168737
agggccaatgggacacaggtggagggtataaagagcgctcccctagaattaattaagaag 7653
............................................................ 168677
cttgctgcctcattctcatctgctccagagtctgacccattgattccacaaattctcacc 7593
............................................................ 168617
cactgcctccaagggggatgccgggcaggacagaggactcaggctacaagacctgacttc 7533
............................................................ 168557
ttcaggagcctaacattgaacgatgaaaagaagttaatccagctttgtccaaatcctcac 7473
............................................................ 168497
gcacagttgctgtgggaaacaactgatatataaatatatatatatgtctaaatatctttg 7413
............................................................ 168437
gtgttaactatataggactttaacatgaatttatttagaattcatgattcagaaattgga 7353
............................................................ 168377
aaagtgacataactaattcccagatctgcattttatcctgtctggagccatttataagat 7293
............................................................ 168317
gggataataatcactgcatcttagatctgttggtgacttttaaagattgtttgaattaag 7233
............................................................ 168257
tacataggccttcattcactaaatgtatacatacatatcatgtataatatattatatagc 7173
............................................................ 168197
acatatttcctggggttgaacccatgtaatttttgttgttctgcttgagggtcttttgaa 7113
............................................................ 168137
atgcaaatcgatatgcttaggcattgcctcaggaagaaagacaaaattctcaggcaaaga 7053
............................................................ 168077
cactgaaataggcaaggcaaatccaatggcaagagcagccctgtagggtaagagggtaat 6993
............................................................ 168017
gagtaattctcacaccattactgatgcctaaaattttaggattttatgtactttataatg 6933
............................................................ 167957
atttacaaaggaaacatacattttattataaaacttttggtttggaaaactagttggatt 6873
............................................................ 167897
gttttttgtctgctccctcattaaattaatctattcatccattgattcaatcattattca 6813
............................................................ 167837
ttacaaaatttagtgcaagctttagtcttctgggggaggaatattctttttgcatctact 6753
............................................................ 167777
gggaggttgtaagtataaaaacattaggctgaaaactagtgcaagtaagttaatttataa 6693
............................................................ 167717
atgaagaactttgttttaaaaaatcaccagatggttgagtatctggagtagggtatgagg 6633
............................................................ 167657
atccaaatgaactacattccatacaaggaccttagcagaatcaaggaaaggggatgcaaa 6573
............................................................ 167597
gaaaaaatagaaattccagcagggtcctgaatgaagtctcaatggctgttcatgaaaaaa 6513
............................................................ 167537
gatcatattagcaaatagcctgtcattgttcttatacacacccaaactttgtattatggg 6453
............................................................ 167477
cttttatggacaggatggacacatgatgtgaggggagggttggagaactgaaagcagtct 6393
............................................................ 167417
ctctgatcattctggctccacacttcacacactagtgatcttctaagcgaacagaggtgt 6333
............................................................ 167357
gatggcttttcttggttgtcaacttggctacatatagatttaactaaaacccaagtgtct 6273
............................................................ 167297
gtggctatctttaagggaggttttttttttcccttttaattaaatcatttgaggtgggaa 6213
............................................................ 167237
gatacaactttattccaggtcttttgtcatgggaagatccacctttaatgtgggtgacac 6153
............................................................ 167177
cttctggtggcagcatatacatatacatatacatatatatacgtacatacatacatgtat 6093
............................................................ 167117
catatttatgtgaatatgtgtgtgtgtgtgtgagagagagagagagagagagagagagag 6033
............................................................ 167057
agagagagagaatatgaaatatgttctttctataattctatacctttagagaaccatggc 5973
............................................................ 166997
taacacaacaggacagaagagtgggattcttgcaagaatcagaatggtagaagaaaagtt 5913
............................................................ 166937
accagcatcctagcacctgactgttgggaagcaaagcactaaatgatctctagcgtgttt 5853
............................................................ 166877
ctggaccttgatctcaagcctttgtggagggaaagtgttgatcatcctccaaaaatcatt 5793
............................................................ 166817
gaagatgtggaaaactatattcaacaagagctacagtagatcaactaaagctacacaaat 5733
............................................................ 166757
gaactgaatattaaactaacttagcccaaccctctttcagtatgtgctggtgtcttatta 5673
............................................................ 166697
gggtgttccctggtgtttagtgggacaaatgatattcaagactttaatacacaatgtcaa 5613
............................................................ 166637
gtaaacaataaaaatgaaaagaaaagaaaatatgtgactattgagaagggtgttgtttcc 5553
............................................................ 166577
ctgtctcttgtgagactatgccggggcctagcaaacacagaagtggatgctcacaggatg 5493
............................................................ 166517
gatcacagggcccccaatggaggagctagagaaagtacccaaggagctaaaggggtctgc 5433
............................................................ 166457
aaccctataggaggaacaacattatgaactaaccagtaccccggagctcttgactttagc 5373
............................................................ 166397
tgcatatgtatcaaaagatggcctagttggccatcactgcaaagagaggcccattggact 5313
............................................................ 166337
tgcaaactttatatgccccagtacaggggaaagccagggccaaaaagtaggagtggatgg 5253
............................................................ 166277
gtaggggagtgggggggggagggtatgggggacttttggggtagcattggaaatgtaaat 5193
............................................................ 166217
gaggaaaatacctaataaaaatatttaaaaaaaaaaagaaaatatgggccacagtcagga 5133
............................................................ 166157
gaggagatgatcaagtgaactatattgagagattgccacctagtgcaaatgtcagagagg 5073
............................................................ 166097
gatctttggtgataataaaagtgttaaaaatggaggacataaggtattattgagttgagg 5013
............................................................ 166037
ggaatgatggaatagtagaacattaaaagagctaaatgaaagtaaaggaaggacatgata 4953
............................................................ 165977
aatgtagaatttatctaatggtaaattctaagcaaaatctaagcaaaggtacattttcat 4893
............................................................ 165917
tactcagagagtgataaataaaaataatgcaaactgatatgctgagattcttaaaaaata 4833
............................................................ 165857
taaaacatagcataaaagatatgcaaaacaatataatatcatccatacagacgtaagctg 4773
............................................................ 165797
aatcacctcatgagaaggggtaaagatatttttgaaaatataactgtcaaagttgagtat 4713
............................................................ 165737
tttttaaaaggacaaaatcataaactcatcgatcaaacaggttcaattaattctagctat 4653
............................................................ 165677
gtaataaaagtagaaaaccatattttgatgtatcataaaattaaaaacagaaattgtatt 4593
............................................................ 165617
gaaaatcaaaattaaagcttattaacatgtctagacaaaggaggcataagagaggtatga 4533
............................................................ 165557
agcttgctgtacaaatatgcaggtctgagcttgaatctcagcatccacgtaaaagctgag 4473
............................................................ 165497
caacaagatcttcatttgtaacccaagggcagaaggaagtgtatatagagacaggtaggg 4413
............................................................ 165437
cttggtggtcaatcaaaatagcaagctctaggatcaataagtaatcctgtctcaaaaagt 4353
............................................................ 165377
aaggtagagagtggtagaggaagacccatggcttctgcatgagcacacacatgcctaatg 4293
............................................................ 165317
caaggagagagagagggagagagagagagagagagagagagagagagagagacagagaga 4233
............................................................ 165257
cagagaaacagagagacagagagacagagagagtgagacacagagagagaattaaatgat 4173
............................................................ 165197
aaactttctccatagaatcaaaaagcaataaagatgatatattatacatagtgaaaggtt 4113
............................................................ 165137
gaaagcttctgtaatgctatccagagagtgctgaaagaaaggggggagccacactatata 4053
............................................................ 165077
cagttaacagataaaaatacttatgggatttaatcaaatagaaaactttctgcacagcaa 3993
............................................................ 165017
aggaaacaatctgtggaaaacaatagaatgcagtaaaatgtttccaattgttatctgaca 3933
............................................................ 164957
agaagtctctattccaaattcatgaaacacacataacacaatagcaaagaacaaaataac 3873
............................................................ 164897
tcaattttaaaatgagcaaagaatttgaatagatggatccccaaagaaatacaaatggtc 3813
............................................................ 164837
agttggcattgaatctcaagcatccgtgtaaaagttcaacattgttaatcattgaacaag 3753
............................................................ 164777
tttaaagccaccctgaggcagaagactatgtgtaagcaagggcaaacacccctagatgct 3693
............................................................ 164717
attgctgagaatgtgaattgttccagcaactatattaaaagttgtagagggcctaaagct 3633
............................................................ 164657
gtagccattcctcactcagcgatccatacaagatctggaatcaacattctgaagagatat 3573
............................................................ 164597
tagaaccttcatattcactgtagcatccattaataacaacaaccaagatatagaatcaga 3513
............................................................ 164537
tgggtccatcaacagttgaatggaatgtgcttcaatctttttaaaaataaagtgaaatgt 3453
............................................................ 164477
gaactattgtgagaatattattgaagctgaaggatattatcctgttgattattgactgat 3393
............................................................ 164417
gtgtgaggctccaacttgaaggtggtcctaactctgtaagaaaactggctcagcaaacca 3333
............................................................ 164357
tgaagagcaagtcagtgagcagcaatctttcatgctctcagcttgagctcctgccctgac 3273
............................................................ 164297
ttccttcagtgatggagaatgacctggacgcataaggtgaaataaaccctttcctcctgc 3213
............................................................ 164237
aagctagtattggccatggggtttactacagcaacagaaagcaactaggacagaaagtaa 3153
............................................................ 164177
tggaaataactgatgtaacatcaatcaaatataaacttgagtaatgatgaaaagagttaa 3093
............................................................ 164117
tatttcctgcatattttacacatgatagccttgttgctaatttagattatttaacttatt 3033
............................................................ 164057
ttattttgacaagtaccctacattgtaaatattatttctatctacatttgttgcattaca 2973
............................................................ 163997
caattcagactacttatctattctccatagccatgcagctctaatggcgagatcaggact 2913
............................................................ 163937
tgaatccaagaagttggatccctgagattatccaatatagttatgaatatggtgttgaca 2853
............................................................ 163877
gtagagattatagtagtgatgatagtagcagtaatactgcaattggtagtggtgatgatg 2793
............................................................ 163817
ttggtggtggtagtagagccagcagtgatagtgatgatggtgatggtgatagaggtaagg 2733
............................................................ 163757
ataatgaaatggctcagcagctaagggcaattattgtataagcctgagaacttgaggcca 2673
............................................................ 163697
atctctagaacctaaatgaaagtggaaagagagaactgtacaaagttgtcatttgacatc 2613
............................................................ 163637
tacacatgtgccatggcacacacacacacacacacacacacacacacacacacacacaca 2553
............................................................ 163577
cacacagagagagagagagagagagagagagagagagagataatataataaacaagaggt 2493
............................................................ 163517
tatgttaagttattcatccatgcaatgcagataatagtgtactgtgtgaagtcagccatc 2433
............................................................ 163457
atgaaatcatgtgggaacacatgtctcagaatggtccttgcagtattcatcatacctaaa 2373
............................................................ 163397
tcacaaagaataataatgcaacaagccagtcactgctccaaaaatgggaaggggaaatgt 2313
............................................................ 163337
catcctgttttcagatatgcacattttgttcatcatattatacaagagaaacatcatggt 2253
............................................................ 163277
aattctcacaaaaagacttgcttcaatctgtcccaagagataatgaatgcaatatgtgtt 2193
............................................................ 163217
cagacccttagcagacaagctgggagctgtagcagcaaattagctatactgctttgtgct 2133
............................................................ 163157
cctgatgggttgcatgtgtgcagctgccgaagagctatctggctttgtgaaggaaagaca 2073
............................................................ 163097
cacacgcgcgcacacacgcgcgcgcacacacacacacacacacacacacacaccacacac 2013
............................................................ 163037
acacacacacgtcagttaatttttggtatgccttggctatctcaaaggctgggcagttct 1953
............................................................ 162977
aatcctccccaaggctagcatttatttctctcctgtaatcctggcttaacaccctctaca 1893
............................................................ 162917
tctatattttatcttttttgccatgactccttctgtggagctctctagtctttgcagtcc 1833
............................................................ 162857
aatacgcttctgggcagcctgtctggaggccacattccttctcacctacattttggatga 1773
............................................................ 162797
ttgtctttctaagtctgatcctgatcggtttgcctgaaaatcatggcaattctactatcc 1713
............................................................ 162737
tcctcccagtttttaccctgtgcacatctaaagggctcaccacagtctatctgcccaacc 1653
............................................................ 162677
atttgccactggctttttctttcacttcttatttttttaattgtgtatttatttcattta 1593
............................................................ 162617
cattttcaatgctatcccaaaagtcccccacatgctctcccacccactcccctacccacc 1533
............................................................ 162557
tactcccacttcttggccctggcattcccctgtactgaggcatataaagtttgcacgacc 1473
............................................................ 162497
aatgggcctctctttccactgatggccgactaggccatcttctgattcaaatgtagctag 1413
............................................................ 162437
agacatgagctccgtccggggggagggggggtattggttagttcatattgttgttccacc 1353
............................................................ 162377
tataggattgcagataccttcagctccttgggtactttctgtagctcctccattgggggc 1293
............................................................ 162317
cctgtgatccatccaatagctgactgtgagcatccacttctgtgtttgccaggctccagc 1233
............................................................ 162257
atagtctcacaagagacagctatatctgggtcctttcagcaaaatcttgctagtgtatgc 1173
............................................................ 162197
aatggtgtcagcgtttggaagctgattatggggtggatccctggatatggcagtctctag 1113
............................................................ 162137
agggtccatcctttcgtctcagctccaaactttgtctctgtaactccttccatgggtgtt 1053
............................................................ 162077
ttgttcccaattctaagaaggggcaaagtgtccacactttggtctttattcttcttgagt 993
............................................................ 162017
ttcatgtgtttagcaaattgtatcttatatcttgggtattctaaatttctgggctaatat 933
............................................................ 161957
ccacttatcagtgagtacatattgtgcgagttcttttgtgattgggttacctcactcagg 873
............................................................ 161897
atgatgccctccaagtccatccatttgcctaggaatttcataaattcattctttttaata 813
............................................................ 161837
gctgagtagtactccattgtgtaaatgtaccacattttctgtatcctttcctctgttgag 753
............................................................ 161777
gggcatctgggttctttccaacttctggctattataaataaggctgcaatgaacatagtg 693
............................................................ 161717
gagcatgtgtccttcttaccggttggaacatcttctggatatatgcccaggagaggtatt 633
............................................................ 161657
gcgggatcctccaattttccaattatgtccaattttctgaggaaccgccagactgatttc 573
............................................................ 161597
cagagtgattgtataagcttgcaatcccaccaacaatggaggagtgttcctctttctcca 513
............................................................ 161537
catccacgacagcatctgctgtcacctgaattttttatcttagccattctgactggtgtg 453
............................................................ 161477
aggtggaatttcagggttgttttgatttgcatttccctgatgattaaggatgttgaacat 393
............................................................ 161417
tttttcaggtgcttctcagccattcagtattcctcaggtgagaattctttgtttagctct 333
............................................................ 161357
gagccccattttttaatggggttatttgattttctggagtccaccttcttgagttcttta 273
............................................................ 161297
tatatattggatattagtcccctatctgatttaggataggtaaagatcctttcccaatct 213
............................................................ 161237
gttggtggtctttttgtcttattgacggtgtcttttgccttacagaaactttgcaatttt 153
............................................................ 161177
atgaggtcccatttattaattcttgatcttacagcataagccattgttgttctattcagg 93
............................................................ 161117
aatttttccctgtacccatatcttcgagggttttccctactttctcctctataagtttca 33
............................................................ 161057
ctgtctctggttttatgtggagtttcttgatc 1
................................ 161025
IdTypeDateWhodidComment
25186ImportOldDb09/04/:00f_old_db
25187ReSetShortOvlp09/04/:48dbo
167656CreateSwitchPt11/20/:05chenhctpf_builder 1.6
Toolkit wrapper version: built Nov 19 2008 using /netopt/ncbi_tools64/c++.by-date//GCC401-Release64/lib
Accession%idPosition (strand) Accession%idPosition (strand)
C3H-113N14AC100%pos 20451 (R-) &C3H-166K19&AC99.87%pos 68016 (F-) C3H-197M22&AC99.19%pos 91473 (F-) C3H-39M5AC99.29%pos 35216 (R+) AC99.27%pos 52039 (F-) C3H-73E18AC100%pos 156770 (R-) AC99.51%pos 7681 (F+) C3H-73F17AC100%pos 156731 (R-) AC99.17%pos 7683 (F+) C3H-76E18&AC99%pos 7682 (F+) C3H-9G13&AC99.49%pos 36611 (F+) CH29-13C9&AC99.11%pos 7352 (F-) &AC99.11%pos 168376 (F-) CH29-36E5&AC99.16%pos 134056 (F+) CH29-500B4AC99.1%pos 127442 (R-) &CH29-510A12&AC99.86%pos 111770 (F+) CH29-554B19AC99.38%pos 83127 (R-) &AC99.38%pos 96750 (R-) &CH29-616G11&AC99.33%pos 147902 (F-) CH29-618D3AC99.87%pos 159594 (R-) &CH29-91G16AC99.39%pos 30936 (R-) &RP24-180J23&AC99.43%pos 84340 (F-) RP24-246O7&AC99%pos 60930 (F-) RP24-290F22AC99.31%pos 8126 (R-) AC100%pos 24877 (F+) AC99.31%pos 169150 (R-) &RP24-334M18AC99.24%pos 8093 (R+) AC99.12%pos 159389 (F-) RP24-334N19AC99.56%pos 8060 (R+) AC99.59%pos 159392 (F-) RP24-375M16AC99.32%pos 130375 (R+) &RP24-83H21AC99.03%pos 6482 (R-) &AC99.03%pos 167506 (R-) &
Fosmid Ends
Accession%idPosition (strand) Accession%idPosition (strand)
WI1-1071C17AC99.64%pos 65619 (R+) AC100%pos 107647 (F-) WI1-110G1AC99.81%pos 81945 (R-) AC99.72%pos 41303 (F+) AC99.81%pos 95568 (R-) &WI1-1203D11AC99.57%pos 67798 (R-) AC100%pos 26452 (F+) WI1-1211K3&AC100%pos 124424 (F+) WI1-1267J16AC100%pos 84910 (R+) AC99.83%pos 136180 (F-) AC100%pos 98533 (R+) &WI1-127C19AC99.84%pos 116443 (R-) AC100%pos 80382 (F+) WI1-1318C22AC100%pos 65609 (R+) AC99.73%pos 103264 (F-) WI1-1320L11AC100%pos 24786 (R+) AC100%pos 64640 (F-) WI1-1336I21AC100%pos 4089 (R+) AC100%pos 41933 (F-) WI1-1389M24AC100%pos 71354 (R+) AC99.68%pos 116657 (F-) WI1-13B15AC99.85%pos 68307 (R-) AC100%pos 29474 (F+) WI1-1446I5AC100%pos 74776 (R+) AC100%pos 112142 (F-) WI1-1685J9AC99.73%pos 82482 (R-) AC99.73%pos 55617 (F+) AC99.73%pos 96105 (R-) &WI1-1734C6AC100%pos 76502 (R-) AC99.85%pos 33214 (F+) WI1-1754M1AC99.47%pos 69660 (R-) AC100%pos 29993 (F+) WI1-180G6AC99.85%pos 56565 (R+) AC99.14%pos 81408 (F-) &AC99.14%pos 95031 (F-) WI1-1875B23AC99.23%pos 114310 (R-) &WI1-1992F4AC100%pos 32034 (R-) &WI1-2049G19&AC100%pos 108034 (F+) WI1-2125I1AC100%pos 106063 (R-) AC99.83%pos 66218 (F+) WI1-2210P19AC100%pos 13420 (R-) &WI1-2227A11&AC99.46%pos 70824 (F+) WI1-2229K9AC99.6%pos 78553 (R-) AC100%pos 43972 (F+) WI1-2271H23&AC100%pos 107330 (F+) WI1-2417J3AC99.22%pos 4150 (R-) &WI1-2483I1AC99.67%pos 83270 (R+) AC99.61%pos 127014 (F-) WI1-393D16AC100%pos 91413 (R-) AC100%pos 53894 (F+) WI1-453O12AC100%pos 59319 (R+) AC100%pos 105341 (F-) WI1-612L12AC100%pos 2506 (R+) &WI1-725H23&AC99.75%pos 28479 (F-) WI1-748J3&AC100%pos 103731 (F-) WI1-876E21AC99.5%pos 71726 (R-) AC99.62%pos 31297 (F+) WI1-991C15AC100%pos 19402 (R+) AC99.51%pos 58404 (F-) WI1-991O22AC100%pos 19390 (R+) AC100%pos 58426 (F-)
hAT-Charlie
hAT-Charlie
hAT-Charlie
TcMar-Tigger
TcMar-Tigger
TcMar-Tigger
TcMar-Tigger
Low_complexity
Low_complexity
Low_complexity
Low_complexity
Low_complexity
Low_complexity
Low_complexity
Low_complexity
Low_complexity
Low_complexity
Low_complexity
Low_complexity
Low_complexity
Simple_repeat
Simple_repeat
Simple_repeat
Simple_repeat
Simple_repeat
Simple_repeat
Simple_repeat
Simple_repeat
Simple_repeat
Simple_repeat
Simple_repeat
Simple_repeat
Simple_repeat
Simple_repeat
Simple_repeat
Simple_repeat
Simple_repeat
Simple_repeat
Simple_repeat
Simple_repeat
Simple_repeat
Simple_repeat
Simple_repeat
Simple_repeat
Simple_repeat
Simple_repeat
Simple_repeat
Simple_repeat
Simple_repeat
Simple_repeat
Simple_repeat
Simple_repeat
Simple_repeat
Simple_repeat
RLTR20C1_MM
RLTR20C2_MM
RLTR17B_Mm
RLTR17B_Mm
RLTR17B_Mm
RLTR31D_MM
RLTR31D_MM
RMER20C_Mm
ORR1B2-int
ORR1B2-int
ORR1B2-int
ORR1B2-int
ORR1B2-int
ORR1B2-int
hAT-Charlie
hAT-Charlie
hAT-Tip100
hAT-Tip100
IAPEY3-int
IAPEY3-int
RLTR10-int
RLTR10-int
RLTR10-int
ORR1B1-int
Low_complexity
Low_complexity
Low_complexity
Low_complexity
Low_complexity
Low_complexity
Low_complexity
Low_complexity
Low_complexity
Low_complexity
Low_complexity
Simple_repeat
Simple_repeat
Simple_repeat
Simple_repeat
Simple_repeat
Simple_repeat
Simple_repeat
Simple_repeat
Simple_repeat
Simple_repeat
Simple_repeat
Simple_repeat
Simple_repeat
Simple_repeat
Simple_repeat
Simple_repeat
Simple_repeat
Simple_repeat
Simple_repeat
Simple_repeat
Simple_repeat
Simple_repeat
Simple_repeat
Simple_repeat
Simple_repeat
Simple_repeat
ERVB4_3-LTR_MM
ERVB4_3-LTR_MM
RLTR35B_MM
RLTR20C1_MM
RLTR20C2_MM
RLTR20C2_MM
RLTR17B_Mm
RLTR17B_Mm
RLTR31D_MM
RLTR31D_MM